hyppo v0.2.0

Note: People with a "+" by their names contributed a patch for the first time.

Release date: 08 February 2021 Supports: Python 3.6+.

New features

  • Added restricted permutation functionality for Dcorr

  • Kernel functions now wrap scikit-learn and support keyword arguments

  • hyppo.ksample.Energy

  • hyppo.ksample.DISCO

  • hyppo.ksample.MMD

  • Fast 1D exact Dcorr O(n log n)

  • hyppo.ksample.Hotelling

  • hyppo.ksample.MANOVA

  • hyppo.independence.MaxMargin

Bug Fixes

  • Fixed error check for k-sample tests to be between samples instead of within

  • Time series doesn't clip negative values

  • Fix docs not building on netlify

  • Fix p-value calculations for permutation tests to be more in line with the literature

  • Fix hyppo.independence.Dcorr and hyppo.independence.Hsic incorrect stats

Documentation

  • Update badges and README to FIRM guidelines

  • Incorrect equation in :meth:hyppo.tools.circle docstring

  • Update README to be in line with scikit-learn

  • Remove literature reference section in docstrings, add links to papers

  • Add docstrings for :mod:hyppo.tools functions

  • Add overview.py file for an overview of the package

  • Add tutorials folder, rewrite so it is more user-friendly (port independence, k-sample, time series)

  • Add examples folder with more information about unique features

  • Move to sphinx-gallery instead of nbconvert

  • Use automodule instead of autoclass

  • Make clear about the package requirements and docs requirements

  • Make changelog into a single file

  • Add external links to neurodata and code of conduct

  • Add citing page to cite the package papers

  • Make index page a clone of README

  • Update MakeFile for more options

  • Add intersphinx mapping with links externally (numpy, scipy, etc.) and internally

  • Add docs for statistic function

  • Add discriminability tutorial

Maintenance

  • Fix typos in warning commits

  • Updated tests to precalculate distance matrix

  • Moved from Travis CI to Circle CI

  • Raise base requirements.txt to fix failing tests on CircleCI

  • Add code coverage config files

  • Add documentation folders and files to .gitignore

  • Remove reps warning test

  • Cache numba after first call to speed up runs

  • Fix netlify config to new doc build structure

Authors

  • Sambit Panda

  • Vivek Gopalakrishnan +

  • Ronak Mehta

  • Ronan Perry +

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hyppo v0.2.1

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